Browse of TCMCG025C50841 protein

CDS

Accession Number	TCMCG025C50841
gbkey	CDS
Protein Id	XP_021656630.1
Location	complement(join(69630..70240,71056..71427,71847..72948,73892..74187,74585..74663,74796..74883,75146..75278,75338..75605,75750..77081,77484..77753,79379..79625,81983..82042,82358..82690,82789..82867,93177..93256,93357..93431,94513..94593,94682..94769,95054..95140,95259..95398,95550..95623,96505..96528))
Gene	LOC110647216
GeneID	110647216
Organism	Hevea brasiliensis

Protein

Length	1972aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA394253
db_source	XM_021800938.1
Definition	mediator of RNA polymerase II transcription subunit 13 isoform X1 [Hevea brasiliensis]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACAAATGTTTTTAGAATTGGAGGCCTTCATCATGTATCATGGTTCCAGTTTCTCCCTAATGAATCTGATTTGAACTCTCTACTGGATAAGAGTATAAAGTTAGAGCAGAAAGATGCTGCTACATGGCTTGTGCTTTGGTCTCATTTGCAGTTGCAGAAAGACGGATTTCTCAGCACTTGGACTAATTCCTTTGTTGGACCTTGGGATCCATCTCAGGGTTTGCACAATCCAGATGAGAAAATAAAACTCTGGCTTTTTCTTCCTGGGCGTCATTCTTCTGTTGTTGAGAAGGCTCAAGCTGCGGTGTCTAGATTAAGAGTTGTTGCCTCTGGAATTTGGGTGGCTCCTGGGGACAATGAAGAAGTTGCTGCGGCCCTTTCTCAGTCTTTAAGGAATTGTATAGAAAAAGCTCTTGTTGGACTTTCTTACATGAGATTTGGAGATGTGTTTTCAAAGTATAACCCATCTCAAAGTGAAGGACTCTTCAGGAGACAACCTACAGTTGAGTTCATCTTTGCTGCTACTGAAGAGGCAATCTTTGTGCATGTCAGAATATCTGCAAAGCATATCCGGCCACTTTCAACCAGTGACATAGAAAGAGTGTTAAAGTGTTCTGCTAATAATTCTGGTTACAGGCTTCCAGTCATTGTTTCTCCTCATGGAATGCGTGGTTGGCTCACAGGATGTTGTCCAAATGATCTTGTCAAGCAAGTTTATTTCAGCAGTTCTGGCAAGTTTAGGACATCAAATGGATTTATAGGTCTACCAAACCATTTTTCTCAAGGGCCTGGCTGCCTGCTGAGGGGGCAAAATTGCTATGTTGAAGTGACACTTGGTTGTCCTAGATCAGAAAGTGAGAAGGGATTGCGATCAAACTCAAATTTGATCAGGAACTTACCTAAGAATCACGTTGTGGAATCTCCTGCTATAGGAAGAGGTGATCATAAGGGATCTCCAGTTCAAACATCTGTACATGAGAAAGCATTTATCTATCCAGCGGAGGCAGTAGTTGTTCCAGTCTTGCAAACATCTTTTGCTAGATCTTCTCTGAAAAGATTTTGGCTCCAAAATTGGATAGGTCCATCATTGCCTGGTTCATCTTTCGTTATGCATTGTGGTGGTGATATAGATAATATGGAAGGATCTTGGATTGAATCTAATGGTATACGTATACAGCGTGGCTATAACAGTAGTAGCAATAGTAATAGTAGCAGTATTGGCTCCATAAGCAGCAGTTCTAGTGATAGTGATCGCAGAATGACCACAGAAGCTGGTGATCTTGAGGCAGATGCAGATTCATTATCATGTAGACAATCTGGTTTATCTTCTAATGATCAGTTGGAAAATGATGGCCCCAAATTGGGTTCTAAACGTCCTCATTCAGGGGTTACAGAATCGTATGGTCAAATGGGCATTGTAAAAAATTCTTCTATGCAAGACGTGTACAAGTCTGATTTTGGTTCTTTTGAAGTTGGCAATTCAGCCATCACAGGGGTTGCAAACGAGCAGATTGGATCTCAATTAGATTGGGATGATGATGATAGAGGTATGGGGATTAATATCCAAGCTCTTCTTTCTGAATTTGGTGATTTTGACGACTTCTTTGAGAACGATGCCTTGCCTTTTGGAGAGCCCCCTGGAACAGCAGAGTCGCAGGCTCTTATGTTTTCTGCTCCAGATTGTGGAGAAGTTGTTAGCAGTCCTATTGGGGTAATGGATGTTGCAGATCATATGCTTTTGCCTGTAGGTTTTCCATCCTTTGAGAGCTTTAATCCACCTCCCACAGCAGTCATAGATGAGTGTGTCAGCAAAAATCAAGAAATCGCACTTGATGCTCTCACATCAGTTCCAGTGAACCACACTCCACCATCTTCTGCAGGTGAGTTTGATCATTTAATCAAAGCTGAAGCTCTGATGTCCTTTGCTCCTGAATATGGAGCAGTTGAAACCTGCGCAAGTGAGTTCTTCCCATCAATTTTCAGAAGCCCATATTGCCCAAAGTCTCGCAAAGTTGAGAGTTCAAATTCAAGCACAAACAATTACACGTATAGTGCAACACCTCCCTCTTCTCCTTGCTTAGATGGATCAGATGAGAAGACTGGCATGCCTGTGAATGCAAAAGCAGGTGTCAGGATGGACATAAAGAAATACTACACTCATGTGGAGACTGGTAAAGTGCAATGTAATAGAATATCTGTCACACAAAATGAGGGATTGGTACCATCTTCATTCTCTACAGTCAATTCTTCAAATGCCGTCAAATCTGTCCAGAGGAAAATGGCCGAAGCCACAGTAGGATCAGAAAACTTCCTACTTTCTTTGAAGACTGTGTTGGCAACTGAAGTTGAATGTCTTATGTTCCAAGCTACCATGTGCAGGGTACGGCATGTGCTGTTGTCTTCTTGTAACCCTGCACCTCAAAGCTTGAGTAGGTTAAGCAGCGGCACTGTTTTGAGTGAATTGCCTGGTGATGGAAGTACCATGACAGACAATATATCTAGCAGATATGAGGTAAAGAAGAAAGAATCTATACCAGTTAGAATAGCTGGTGATATTGATGGAGTGCTAGATGGGCACCACAATGCACCTGTTGGTGTTTGGCGCTCTGTTGCAGTTCCTAAAGTAACCAAACCTAGTAGTTCACCAAGTATTGAAGTGAGTCCATCGTTACCTCACCATTCATTGAATGAGGAAAGAATGCTTTCATATAAGAATAGACAACCACTGCAGGAGCTGCTTGATGGCATGGCATTACTTGTCCAGCAAGCCACTTCTTTTGTTGATGTGGCTCTTGATGCAGATTGTGGTGATGGTCCTTATGGTTGGCTTGCATTACAAGAGCACTGGAGGCGAGGATTTTCTTGTGGCCCTTCCATGGTCCATGCAGGTTGTGGGGGAACTTTGGCTTCTTGCCATTCCCTGGACATTGCTGGCATGCAGTTAGTAGATCCTCTTTCTTCTGATATTCATGCTTCCTCTGTGATTAGCTTGCTTCAGTCTGAAATCAAAACAGCCCTAAAATCTGCATTCGAGAATTTGGATGGCCCATTATCTGTCACTGATTGGTGCAGGGGCCGCAGTCAATCGGGTGATGTAGGTACCACATGCGATGGATCTTTGGCTGATTCTACTTTAAGCGAGTGCAAAGATTCTTCAAGCACTGTATGTTTATCTGTTGGAGAACCAATGAGCCCAGCCCAGTCTTCTGCTGGTGCCTCTTCTTGCCTTAAAGTTGCTGCAGTGGATGGAGCTAAAGCGGATGATACTGGCCAAAGGAGATTGAGCCAAGAAATAGAGTCAGAGCAGCTTTCATGCTCCCGAAGGCCATCACTTTTTGTTCTTCCTTCCCCTGCTATACTTGTTGGGTATCAGGATGATTGGCTTAAGACATCGGCAAGCTCTTTACAACTATGGGAAAAGGCTCCTTTTGAACCATATGCTTCACCAAAACCTATTTCTTATTGTGTTATATGTCCAGACATTGATCCTCTTACTTCTGCTGCTGCTGATTTTTTTCAACAACTCGGAACTGTTTATGAGATCTGCAAACTGGGAACTCATCAACCTCAGAGTTTGGGAAACCAAATGGAGATAGACTCGGGGAAATTGTCAACTTCTGGTTTTGTGATGCTTGATTGCCCTCAATCAATGAAGATAGAAAGCAGTAATACATCTCTTGTGGGTTCGATAAGTGATTATTTTCTCTCTCTCTCCAATGGTTGGGACTTGACAAGCTATCTTAAATCTCTTTCAAAGGCTGTTAAATCCTTAAAAATTGGTCCGTGCATATCAACAAGCACAAAAGAAGGAAATAGTGGTCCTTGTATGGTTATCTATGTGGTGTGCCCCTTTCCCGAACCTATTGCGGTTCTACAAACTATCATTGAATCTTCTGTTGCTGTTGGATCAACAGTTCTTCCATCAGATAGAGAGAGGAGGCCTCTATTGCTGAGTCAGGTTGGCAAGGCTTTAAGTTGCTCAGCAGTTGTGGATGAAGCATCACCATCAAATGTTCTAGTACTTTCAGGGTTTAATGTTCCTAAATTGGTATTGCAAATTGTGACAGTTGATGCCATTTTTAGGGTTACAAGTCCTGCACTTAATGAACTTGTCATTCTTAAAGAGACTGCTTTCACTGTATACAACAAGGCTCGGCGAATTTCGAAAGGATCCTCATATGATGTTCAGTCATCAACATTGTCTAATAGATCTCATCCAGTCATGCAGCAAATGACTTCCATTCCAGCAATATGGAAGGATTGTGTTGGTCCTCGACTTGGAGGGCCTTCACTTCCAAGAGAGGGTGAAATTGATGCTGGCTTGAGACCAGGTACTTGGGATAACTCATGGCAAACAAGGTCTGGAGGGTTGAACTGTGATCCAAGCAGAAATGGAGATCTTTTTCATCAGGATGAAATTCACTACATGTTTGAGCCACTTTTTATTCTTTCAGAGCCTGGTTCTCTAGAGCATGCAGCTGCACCTGGAGTTTTTGGTAATTTAACTGCAGAATCTTCAAAGCTGTTATCTGATGATAGTGGTGGAGGCTTCATGCAAAGTGGCAGTTCAGCAGCGAGTTCAGATACTGGATCAAGCTCTCAACTTGATGGATTGGAGCCTGATGGCGTTGGAGGTACTTACCAAAAGACTCTTCCAAGCCTACATTGTTGCTATGGATGGACAGAGGATTGGCGTTGGCTAGTGTGCATCTGGACAGATGCACGGGGAGAATTGCTTGACAGCCATATATTTCCTTTTGGTGGAATTAGCAGTCGACAGGACACAAAGGGCTTGCAATGCCTCTTTGTGCAAGTTCTTCAGCAAGGCTGTCAGATACTTCAGGCTTGCTTCTCTCATGATATTGGTTCTGCCAAGCCTAGAGATTTTGTGATTACACGCATTGGAAATTTCTTTGAGCTTGAATGCCTAGAATGGCAGAAAGCTATTTATTCAGTTGGGGGTTCTGAGGTGAAGAAATGGCCCCTGCAACTGCGGCGATCTATGCCCGATGGGATGTCTGCTGGTAGTAATGGGGCTACCTTGCAACAACAGGAGATGAGTTTAATGCAAGAGAGAACTCTTCCTTCCTCACCCAGTCCAATGTACAGCCCTCACTCAAAAGGTTCTGGCTTTATGAAGGGTGGTTTAGGACAATCTTCTGCAAGAAAACAGCTTATAGGTGGACACACAGTGGTTGACAGCTCAAGGGGAATGCTTCAGTGGGTTCAGAGCATCAGTTTTGTTGCAATTTCGATTGACCATTCTTTACATTTGGTTTTTCAAGCAGATTCACCATCTCCTGGAGGAACTCAGAGTGGCAATGGTGTTGGTGCTTCTGGCTATTTGGAAGGTTTCACTCCTGTAAAGTCTCTCGGTTCTTCTTCTGCGTCTTACATTTTAATTCCATCACCCAGCATGCGCTTCCTGCCTCCAACACCTCTTCAGCTTCCCACATGTCTCACTGCTGAGTCACCACCACTTGCACATCTCCTCCATAGTAAGGGCTCTGCAATTCCCCTCTCAACGGGCTTTGTGGTTTCCAAAGCCGTACCTTCTATGAGAAAAGACTACAGGAGCAACTCGCGGGAAGAATGGCCCTCAATTCTTTCTGTGAGTCTCATTGATTATTATGGGGGTAATAACGTTATTCAAGAGAAAATCTCTAGGGGGGTTATGAAGCAAGGTGGACGACCTTTAGGCTCTGAAGTTAGAGACTTAGAAATTGAAATCCACTTGATTCTTGAGTCTATAGCAGCTGAACTTCATGCCTTATCGTGGATGACTGTGAGCCCAGCATATTTGGAGCGACGGACTGCACTGCCATTTCACTGTGACATGGTTTTAAGGCTTAGAAGGCTGCTTCATTTTGCTGATAAGGAGCTCTCTTCGCAACCTGATAAGTCCCAGATGTAA

Protein:   MWTNVFRIGGLHHVSWFQFLPNESDLNSLLDKSIKLEQKDAATWLVLWSHLQLQKDGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVVEKAQAAVSRLRVVASGIWVAPGDNEEVAAALSQSLRNCIEKALVGLSYMRFGDVFSKYNPSQSEGLFRRQPTVEFIFAATEEAIFVHVRISAKHIRPLSTSDIERVLKCSANNSGYRLPVIVSPHGMRGWLTGCCPNDLVKQVYFSSSGKFRTSNGFIGLPNHFSQGPGCLLRGQNCYVEVTLGCPRSESEKGLRSNSNLIRNLPKNHVVESPAIGRGDHKGSPVQTSVHEKAFIYPAEAVVVPVLQTSFARSSLKRFWLQNWIGPSLPGSSFVMHCGGDIDNMEGSWIESNGIRIQRGYNSSSNSNSSSIGSISSSSSDSDRRMTTEAGDLEADADSLSCRQSGLSSNDQLENDGPKLGSKRPHSGVTESYGQMGIVKNSSMQDVYKSDFGSFEVGNSAITGVANEQIGSQLDWDDDDRGMGINIQALLSEFGDFDDFFENDALPFGEPPGTAESQALMFSAPDCGEVVSSPIGVMDVADHMLLPVGFPSFESFNPPPTAVIDECVSKNQEIALDALTSVPVNHTPPSSAGEFDHLIKAEALMSFAPEYGAVETCASEFFPSIFRSPYCPKSRKVESSNSSTNNYTYSATPPSSPCLDGSDEKTGMPVNAKAGVRMDIKKYYTHVETGKVQCNRISVTQNEGLVPSSFSTVNSSNAVKSVQRKMAEATVGSENFLLSLKTVLATEVECLMFQATMCRVRHVLLSSCNPAPQSLSRLSSGTVLSELPGDGSTMTDNISSRYEVKKKESIPVRIAGDIDGVLDGHHNAPVGVWRSVAVPKVTKPSSSPSIEVSPSLPHHSLNEERMLSYKNRQPLQELLDGMALLVQQATSFVDVALDADCGDGPYGWLALQEHWRRGFSCGPSMVHAGCGGTLASCHSLDIAGMQLVDPLSSDIHASSVISLLQSEIKTALKSAFENLDGPLSVTDWCRGRSQSGDVGTTCDGSLADSTLSECKDSSSTVCLSVGEPMSPAQSSAGASSCLKVAAVDGAKADDTGQRRLSQEIESEQLSCSRRPSLFVLPSPAILVGYQDDWLKTSASSLQLWEKAPFEPYASPKPISYCVICPDIDPLTSAAADFFQQLGTVYEICKLGTHQPQSLGNQMEIDSGKLSTSGFVMLDCPQSMKIESSNTSLVGSISDYFLSLSNGWDLTSYLKSLSKAVKSLKIGPCISTSTKEGNSGPCMVIYVVCPFPEPIAVLQTIIESSVAVGSTVLPSDRERRPLLLSQVGKALSCSAVVDEASPSNVLVLSGFNVPKLVLQIVTVDAIFRVTSPALNELVILKETAFTVYNKARRISKGSSYDVQSSTLSNRSHPVMQQMTSIPAIWKDCVGPRLGGPSLPREGEIDAGLRPGTWDNSWQTRSGGLNCDPSRNGDLFHQDEIHYMFEPLFILSEPGSLEHAAAPGVFGNLTAESSKLLSDDSGGGFMQSGSSAASSDTGSSSQLDGLEPDGVGGTYQKTLPSLHCCYGWTEDWRWLVCIWTDARGELLDSHIFPFGGISSRQDTKGLQCLFVQVLQQGCQILQACFSHDIGSAKPRDFVITRIGNFFELECLEWQKAIYSVGGSEVKKWPLQLRRSMPDGMSAGSNGATLQQQEMSLMQERTLPSSPSPMYSPHSKGSGFMKGGLGQSSARKQLIGGHTVVDSSRGMLQWVQSISFVAISIDHSLHLVFQADSPSPGGTQSGNGVGASGYLEGFTPVKSLGSSSASYILIPSPSMRFLPPTPLQLPTCLTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSMRKDYRSNSREEWPSILSVSLIDYYGGNNVIQEKISRGVMKQGGRPLGSEVRDLEIEIHLILESIAAELHALSWMTVSPAYLERRTALPFHCDMVLRLRRLLHFADKELSSQPDKSQM